A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.

Identifying the underlying genetic drivers of the heritability of breast cancer prognosis remains elusive. We adapt a network-based approach to handle underpowered complex datasets to provide new insights into the potential function of germline variants in breast cancer prognosis. This network-based...

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Detalles Bibliográficos
Autores: Escala-Garcia, Maria; Abraham, Jean; Andrulis, Irene L; Anton-Culver, Hoda; Arndt, Volker; Ashworth, Alan; Auer, Paul L; Auvinen, Päivi; Beckmann, Matthias W; Beesley, Jonathan; Behrens, Sabine; Benitez, Javier; Bermisheva, Marina; Blomqvist, Carl; Blot, William; Bogdanova, Natalia V; Bojesen, Stig E; Bolla, Manjeet K; Børresen-Dale, Anne-Lise; Brauch, Hiltrud; Brenner, Hermann; Brucker, Sara Y; Burwinkel, Barbara; Caldas, Carlos; Canzian, Federico; Chang-Claude, Jenny; Chanock, Stephen J; Chin, Suet-Feung; Clarke, Christine L; Couch, Fergus J; Cox, Angela; Cross, Simon S; Czene, Kamila; Daly, Mary B; Dennis, Joe; Devilee, Peter; Dunn, Janet A; Dunning, Alison M; Dwek, Miriam; Earl, Helena M; Eccles, Diana M; Eliassen, A Heather; Ellberg, Carolina; Evans, D Gareth; Fasching, Peter A; Figueroa, Jonine; Flyger, Henrik; Gago-Dominguez, Manuela; Gapstur, Susan M; García-Closas, Montserrat; García-Sáenz, José A; Gaudet, Mia M; George, Angela; Giles, Graham G; Goldgar, David E; González-Neira, Anna; Grip, Mervi; Guénel, Pascal; Guo, Qi; Haiman, Christopher A; Håkansson, Niclas; Hamann, Ute; Harrington, Patricia A; Hiller, Louise; Hooning, Maartje J; Hopper, John L; Howell, Anthony; Huang, Chiun-Sheng; Huang, Guanmengqian; Hunter, David J; Jakubowska, Anna; John, Esther M; Kaaks, Rudolf; Kapoor, Pooja Middha; Keeman, Renske; Kitahara, Cari M; Kraft, Peter; Lambrechts, Diether; Le Marchand, Loic; Lejbkowicz, Flavio; Lindblom, Annika; Lubiński, Jan; Mannermaa, Arto; Manoochehri, Mehdi; Manoukian, Siranoush; Margolin, Sara; Martinez, Maria Elena; Maurer, Tabea; Mavroudis, Dimitrios; Meindl, Alfons; Milne, Roger L; Mulligan, Anna Marie; Neuhausen, Susan L; Nevanlinna, Heli; Newman, William G; Olshan, Andrew F; Olson, Janet E; Olsson, Håkan; Orr, Nick; Peterlongo, Paolo; Petridis, Christos; Prentice, Ross L; Presneau, Nadege; Punie, Kevin; Ramachandran, Dhanya; Rennert, Gad; Romero, Atocha; Sachchithananthan, Mythily; Saloustros, Emmanouil; Sawyer, Elinor J; Schmutzler, Rita K; Schwentner, Lukas; Scott, Christopher; Simard, Jacques; Sohn, Christof; Southey, Melissa C; Swerdlow, Anthony J; Tamimi, Rulla M; Tapper, William J; Teixeira, Manuel R; Terry, Mary Beth; Thorne, Heather; Tollenaar, Rob A E M; Tomlinson, Ian; Troester, Melissa A; Truong, Thérèse; Turnbull, Clare; Vachon, Celine M; van der Kolk, Lizet E; Wang, Qin; Winqvist, Robert; Wolk, Alicja; Yang, Xiaohong R; Ziogas, Argyrios; Pharoah, Paul D P; Hall, Per; Wessels, Lodewyk F A; Chenevix-Trench, Georgia; Bader, Gary D; Dörk, Thilo; Easton, Douglas F; Canisius, Sander; Schmidt, Marjanka K; Gonzalez Neira, Anna; Andrulis, Irene L.; Auer, Paul L.; Beckmann, Matthias W.; Bogdanova, Natalia V.; Bojesen, Stig E.; Bolla, Manjeet K.; Brucker, Sara Y.; Chanock, Stephen J.; Clarke, Christine L.; Couch, Fergus J.; Cross, Simon S.; Daly, Mary B.; Dunn, Janet A.; Dunning, Alison M.; Earl, Helena M.; Eccles, Diana M.; Eliassen, A. Heather; Evans, D. Gareth; Fasching, Peter A.; Gapstur, Susan M.; García-Sáenz, José A.; Gaudet, Mia M.; Giles, Graham G.; Goldgar, David E.; Haiman, Christopher A.; Harrington, Patricia A.; Hooning, Maartje J.; Hopper, John L.; Hunter, David J.; John, Esther M.; Kitahara, Cari M.; Koppert, Linetta B; Kristensen, Vessela N; Milne, Roger L.; Neuhausen, Susan L.; Newman, William G.; Olshan, Andrew F.; Olson, Janet E.; Prentice, Ross L.; Sawyer, Elinor J.; Schmutzler, Rita K.; Southey, Melissa C.; Swerdlow, Anthony J.; Tamimi, Rulla M.; Tapper, William J.; Tollenaar, Rob A. E. M.; Troester, Melissa A.; Vachon, Celine M.; van der Kolk, Lizet E.; Yang, Xiaohong R.; Pharoah, Paul D. P.; Wessels, Lodewyk F. A.; Bader, Gary D.; Easton, Douglas F.; Schmidt, Marjanka K.
Tipo de documento: Artículo
Fecha de publicación:2020
País:España
Institución:Instituto de Salud Carlos III (ISCIII)
Repositorio:Repisalud
Lenguaje:Inglés
OAI Identifier:oai:repisalud.isciii.es:20.500.12105/12181
Acceso en línea:http://hdl.handle.net/20.500.12105/12181
Nivel de acceso:Acceso abierto
Palabra clave:Genetic Variation
Genome-Wide Association Study
Germ Cells
Apoptosis
Breast Neoplasms
Circadian Clocks
Computational Biology
Female
GTP-Binding Protein alpha Subunits
GTP-Binding Protein alpha Subunits, Gq-G11
Gene Regulatory Networks
Genotype
Humans
Prognosis
Receptors, Estrogen
Signal Transduction
_version_ 1878733025281310720
author Escala-Garcia, Maria
author2 Abraham, Jean
Andrulis, Irene L
Anton-Culver, Hoda
Arndt, Volker
Ashworth, Alan
Auer, Paul L
Auvinen, Päivi
Beckmann, Matthias W
Beesley, Jonathan
Behrens, Sabine
Benitez, Javier
Bermisheva, Marina
Blomqvist, Carl
Blot, William
Bogdanova, Natalia V
Bojesen, Stig E
Bolla, Manjeet K
Børresen-Dale, Anne-Lise
Brauch, Hiltrud
Brenner, Hermann
Brucker, Sara Y
Burwinkel, Barbara
Caldas, Carlos
Canzian, Federico
Chang-Claude, Jenny
Chanock, Stephen J
Chin, Suet-Feung
Clarke, Christine L
Couch, Fergus J
Cox, Angela
Cross, Simon S
Czene, Kamila
Daly, Mary B
Dennis, Joe
Devilee, Peter
Dunn, Janet A
Dunning, Alison M
Dwek, Miriam
Earl, Helena M
Eccles, Diana M
Eliassen, A Heather
Ellberg, Carolina
Evans, D Gareth
Fasching, Peter A
Figueroa, Jonine
Flyger, Henrik
Gago-Dominguez, Manuela
Gapstur, Susan M
García-Closas, Montserrat
García-Sáenz, José A
Gaudet, Mia M
George, Angela
Giles, Graham G
Goldgar, David E
González-Neira, Anna
Grip, Mervi
Guénel, Pascal
Guo, Qi
Haiman, Christopher A
Håkansson, Niclas
Hamann, Ute
Harrington, Patricia A
Hiller, Louise
Hooning, Maartje J
Hopper, John L
Howell, Anthony
Huang, Chiun-Sheng
Huang, Guanmengqian
Hunter, David J
Jakubowska, Anna
John, Esther M
Kaaks, Rudolf
Kapoor, Pooja Middha
Keeman, Renske
Kitahara, Cari M
Kraft, Peter
Lambrechts, Diether
Le Marchand, Loic
Lejbkowicz, Flavio
Lindblom, Annika
Lubiński, Jan
Mannermaa, Arto
Manoochehri, Mehdi
Manoukian, Siranoush
Margolin, Sara
Martinez, Maria Elena
Maurer, Tabea
Mavroudis, Dimitrios
Meindl, Alfons
Milne, Roger L
Mulligan, Anna Marie
Neuhausen, Susan L
Nevanlinna, Heli
Newman, William G
Olshan, Andrew F
Olson, Janet E
Olsson, Håkan
Orr, Nick
Peterlongo, Paolo
Petridis, Christos
Prentice, Ross L
Presneau, Nadege
Punie, Kevin
Ramachandran, Dhanya
Rennert, Gad
Romero, Atocha
Sachchithananthan, Mythily
Saloustros, Emmanouil
Sawyer, Elinor J
Schmutzler, Rita K
Schwentner, Lukas
Scott, Christopher
Simard, Jacques
Sohn, Christof
Southey, Melissa C
Swerdlow, Anthony J
Tamimi, Rulla M
Tapper, William J
Teixeira, Manuel R
Terry, Mary Beth
Thorne, Heather
Tollenaar, Rob A E M
Tomlinson, Ian
Troester, Melissa A
Truong, Thérèse
Turnbull, Clare
Vachon, Celine M
van der Kolk, Lizet E
Wang, Qin
Winqvist, Robert
Wolk, Alicja
Yang, Xiaohong R
Ziogas, Argyrios
Pharoah, Paul D P
Hall, Per
Wessels, Lodewyk F A
Chenevix-Trench, Georgia
Bader, Gary D
Dörk, Thilo
Easton, Douglas F
Canisius, Sander
Schmidt, Marjanka K
Gonzalez Neira, Anna
Andrulis, Irene L.
Auer, Paul L.
Beckmann, Matthias W.
Bogdanova, Natalia V.
Bojesen, Stig E.
Bolla, Manjeet K.
Brucker, Sara Y.
Chanock, Stephen J.
Clarke, Christine L.
Couch, Fergus J.
Cross, Simon S.
Daly, Mary B.
Dunn, Janet A.
Dunning, Alison M.
Earl, Helena M.
Eccles, Diana M.
Eliassen, A. Heather
Evans, D. Gareth
Fasching, Peter A.
Gapstur, Susan M.
García-Sáenz, José A.
Gaudet, Mia M.
Giles, Graham G.
Goldgar, David E.
Haiman, Christopher A.
Harrington, Patricia A.
Hooning, Maartje J.
Hopper, John L.
Hunter, David J.
John, Esther M.
Kitahara, Cari M.
Koppert, Linetta B
Kristensen, Vessela N
Milne, Roger L.
Neuhausen, Susan L.
Newman, William G.
Olshan, Andrew F.
Olson, Janet E.
Prentice, Ross L.
Sawyer, Elinor J.
Schmutzler, Rita K.
Southey, Melissa C.
Swerdlow, Anthony J.
Tamimi, Rulla M.
Tapper, William J.
Tollenaar, Rob A. E. M.
Troester, Melissa A.
Vachon, Celine M.
van der Kolk, Lizet E.
Yang, Xiaohong R.
Pharoah, Paul D. P.
Wessels, Lodewyk F. A.
Bader, Gary D.
Easton, Douglas F.
Schmidt, Marjanka K.
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author_browse Abraham, Jean
Andrulis, Irene L
Andrulis, Irene L.
Anton-Culver, Hoda
Arndt, Volker
Ashworth, Alan
Auer, Paul L
Auer, Paul L.
Auvinen, Päivi
Bader, Gary D
Bader, Gary D.
Beckmann, Matthias W
Beckmann, Matthias W.
Beesley, Jonathan
Behrens, Sabine
Benitez, Javier
Bermisheva, Marina
Blomqvist, Carl
Blot, William
Bogdanova, Natalia V
Bogdanova, Natalia V.
Bojesen, Stig E
Bojesen, Stig E.
Bolla, Manjeet K
Bolla, Manjeet K.
Brauch, Hiltrud
Brenner, Hermann
Brucker, Sara Y
Brucker, Sara Y.
Burwinkel, Barbara
Børresen-Dale, Anne-Lise
Caldas, Carlos
Canisius, Sander
Canzian, Federico
Chang-Claude, Jenny
Chanock, Stephen J
Chanock, Stephen J.
Chenevix-Trench, Georgia
Chin, Suet-Feung
Clarke, Christine L
Clarke, Christine L.
Couch, Fergus J
Couch, Fergus J.
Cox, Angela
Cross, Simon S
Cross, Simon S.
Czene, Kamila
Daly, Mary B
Daly, Mary B.
Dennis, Joe
Devilee, Peter
Dunn, Janet A
Dunn, Janet A.
Dunning, Alison M
Dunning, Alison M.
Dwek, Miriam
Dörk, Thilo
Earl, Helena M
Earl, Helena M.
Easton, Douglas F
Easton, Douglas F.
Eccles, Diana M
Eccles, Diana M.
Eliassen, A Heather
Eliassen, A. Heather
Ellberg, Carolina
Escala-Garcia, Maria
Evans, D Gareth
Evans, D. Gareth
Fasching, Peter A
Fasching, Peter A.
Figueroa, Jonine
Flyger, Henrik
Gago-Dominguez, Manuela
Gapstur, Susan M
Gapstur, Susan M.
García-Closas, Montserrat
García-Sáenz, José A
García-Sáenz, José A.
Gaudet, Mia M
Gaudet, Mia M.
George, Angela
Giles, Graham G
Giles, Graham G.
Goldgar, David E
Goldgar, David E.
Gonzalez Neira, Anna
González-Neira, Anna
Grip, Mervi
Guo, Qi
Guénel, Pascal
Haiman, Christopher A
Haiman, Christopher A.
Hall, Per
Hamann, Ute
Harrington, Patricia A
Harrington, Patricia A.
Hiller, Louise
Hooning, Maartje J
Hooning, Maartje J.
Hopper, John L
Hopper, John L.
Howell, Anthony
Huang, Chiun-Sheng
Huang, Guanmengqian
Hunter, David J
Hunter, David J.
Håkansson, Niclas
Jakubowska, Anna
John, Esther M
John, Esther M.
Kaaks, Rudolf
Kapoor, Pooja Middha
Keeman, Renske
Kitahara, Cari M
Kitahara, Cari M.
Koppert, Linetta B
Kraft, Peter
Kristensen, Vessela N
Lambrechts, Diether
Le Marchand, Loic
Lejbkowicz, Flavio
Lindblom, Annika
Lubiński, Jan
Mannermaa, Arto
Manoochehri, Mehdi
Manoukian, Siranoush
Margolin, Sara
Martinez, Maria Elena
Maurer, Tabea
Mavroudis, Dimitrios
Meindl, Alfons
Milne, Roger L
Milne, Roger L.
Mulligan, Anna Marie
Neuhausen, Susan L
Neuhausen, Susan L.
Nevanlinna, Heli
Newman, William G
Newman, William G.
Olshan, Andrew F
Olshan, Andrew F.
Olson, Janet E
Olson, Janet E.
Olsson, Håkan
Orr, Nick
Peterlongo, Paolo
Petridis, Christos
Pharoah, Paul D P
Pharoah, Paul D. P.
Prentice, Ross L
Prentice, Ross L.
Presneau, Nadege
Punie, Kevin
Ramachandran, Dhanya
Rennert, Gad
Romero, Atocha
Sachchithananthan, Mythily
Saloustros, Emmanouil
Sawyer, Elinor J
Sawyer, Elinor J.
Schmidt, Marjanka K
Schmidt, Marjanka K.
Schmutzler, Rita K
Schmutzler, Rita K.
Schwentner, Lukas
Scott, Christopher
Simard, Jacques
Sohn, Christof
Southey, Melissa C
Southey, Melissa C.
Swerdlow, Anthony J
Swerdlow, Anthony J.
Tamimi, Rulla M
Tamimi, Rulla M.
Tapper, William J
Tapper, William J.
Teixeira, Manuel R
Terry, Mary Beth
Thorne, Heather
Tollenaar, Rob A E M
Tollenaar, Rob A. E. M.
Tomlinson, Ian
Troester, Melissa A
Troester, Melissa A.
Truong, Thérèse
Turnbull, Clare
Vachon, Celine M
Vachon, Celine M.
Wang, Qin
Wessels, Lodewyk F A
Wessels, Lodewyk F. A.
Winqvist, Robert
Wolk, Alicja
Yang, Xiaohong R
Yang, Xiaohong R.
Ziogas, Argyrios
van der Kolk, Lizet E
van der Kolk, Lizet E.
author_facet Escala-Garcia, Maria
Abraham, Jean
Andrulis, Irene L
Anton-Culver, Hoda
Arndt, Volker
Ashworth, Alan
Auer, Paul L
Auvinen, Päivi
Beckmann, Matthias W
Beesley, Jonathan
Behrens, Sabine
Benitez, Javier
Bermisheva, Marina
Blomqvist, Carl
Blot, William
Bogdanova, Natalia V
Bojesen, Stig E
Bolla, Manjeet K
Børresen-Dale, Anne-Lise
Brauch, Hiltrud
Brenner, Hermann
Brucker, Sara Y
Burwinkel, Barbara
Caldas, Carlos
Canzian, Federico
Chang-Claude, Jenny
Chanock, Stephen J
Chin, Suet-Feung
Clarke, Christine L
Couch, Fergus J
Cox, Angela
Cross, Simon S
Czene, Kamila
Daly, Mary B
Dennis, Joe
Devilee, Peter
Dunn, Janet A
Dunning, Alison M
Dwek, Miriam
Earl, Helena M
Eccles, Diana M
Eliassen, A Heather
Ellberg, Carolina
Evans, D Gareth
Fasching, Peter A
Figueroa, Jonine
Flyger, Henrik
Gago-Dominguez, Manuela
Gapstur, Susan M
García-Closas, Montserrat
García-Sáenz, José A
Gaudet, Mia M
George, Angela
Giles, Graham G
Goldgar, David E
González-Neira, Anna
Grip, Mervi
Guénel, Pascal
Guo, Qi
Haiman, Christopher A
Håkansson, Niclas
Hamann, Ute
Harrington, Patricia A
Hiller, Louise
Hooning, Maartje J
Hopper, John L
Howell, Anthony
Huang, Chiun-Sheng
Huang, Guanmengqian
Hunter, David J
Jakubowska, Anna
John, Esther M
Kaaks, Rudolf
Kapoor, Pooja Middha
Keeman, Renske
Kitahara, Cari M
Kraft, Peter
Lambrechts, Diether
Le Marchand, Loic
Lejbkowicz, Flavio
Lindblom, Annika
Lubiński, Jan
Mannermaa, Arto
Manoochehri, Mehdi
Manoukian, Siranoush
Margolin, Sara
Martinez, Maria Elena
Maurer, Tabea
Mavroudis, Dimitrios
Meindl, Alfons
Milne, Roger L
Mulligan, Anna Marie
Neuhausen, Susan L
Nevanlinna, Heli
Newman, William G
Olshan, Andrew F
Olson, Janet E
Olsson, Håkan
Orr, Nick
Peterlongo, Paolo
Petridis, Christos
Prentice, Ross L
Presneau, Nadege
Punie, Kevin
Ramachandran, Dhanya
Rennert, Gad
Romero, Atocha
Sachchithananthan, Mythily
Saloustros, Emmanouil
Sawyer, Elinor J
Schmutzler, Rita K
Schwentner, Lukas
Scott, Christopher
Simard, Jacques
Sohn, Christof
Southey, Melissa C
Swerdlow, Anthony J
Tamimi, Rulla M
Tapper, William J
Teixeira, Manuel R
Terry, Mary Beth
Thorne, Heather
Tollenaar, Rob A E M
Tomlinson, Ian
Troester, Melissa A
Truong, Thérèse
Turnbull, Clare
Vachon, Celine M
van der Kolk, Lizet E
Wang, Qin
Winqvist, Robert
Wolk, Alicja
Yang, Xiaohong R
Ziogas, Argyrios
Pharoah, Paul D P
Hall, Per
Wessels, Lodewyk F A
Chenevix-Trench, Georgia
Bader, Gary D
Dörk, Thilo
Easton, Douglas F
Canisius, Sander
Schmidt, Marjanka K
Gonzalez Neira, Anna
Andrulis, Irene L.
Auer, Paul L.
Beckmann, Matthias W.
Bogdanova, Natalia V.
Bojesen, Stig E.
Bolla, Manjeet K.
Brucker, Sara Y.
Chanock, Stephen J.
Clarke, Christine L.
Couch, Fergus J.
Cross, Simon S.
Daly, Mary B.
Dunn, Janet A.
Dunning, Alison M.
Earl, Helena M.
Eccles, Diana M.
Eliassen, A. Heather
Evans, D. Gareth
Fasching, Peter A.
Gapstur, Susan M.
García-Sáenz, José A.
Gaudet, Mia M.
Giles, Graham G.
Goldgar, David E.
Haiman, Christopher A.
Harrington, Patricia A.
Hooning, Maartje J.
Hopper, John L.
Hunter, David J.
John, Esther M.
Kitahara, Cari M.
Koppert, Linetta B
Kristensen, Vessela N
Milne, Roger L.
Neuhausen, Susan L.
Newman, William G.
Olshan, Andrew F.
Olson, Janet E.
Prentice, Ross L.
Sawyer, Elinor J.
Schmutzler, Rita K.
Southey, Melissa C.
Swerdlow, Anthony J.
Tamimi, Rulla M.
Tapper, William J.
Tollenaar, Rob A. E. M.
Troester, Melissa A.
Vachon, Celine M.
van der Kolk, Lizet E.
Yang, Xiaohong R.
Pharoah, Paul D. P.
Wessels, Lodewyk F. A.
Bader, Gary D.
Easton, Douglas F.
Schmidt, Marjanka K.
author_role author
collection Repisalud
description Identifying the underlying genetic drivers of the heritability of breast cancer prognosis remains elusive. We adapt a network-based approach to handle underpowered complex datasets to provide new insights into the potential function of germline variants in breast cancer prognosis. This network-based analysis studies ~7.3 million variants in 84,457 breast cancer patients in relation to breast cancer survival and confirms the results on 12,381 independent patients. Aggregating the prognostic effects of genetic variants across multiple genes, we identify four gene modules associated with survival in estrogen receptor (ER)-negative and one in ER-positive disease. The modules show biological enrichment for cancer-related processes such as G-alpha signaling, circadian clock, angiogenesis, and Rho-GTPases in apoptosis.
eu_rights_str_mv openAccess
format article
id ES_4e90fa852f8244b157b13a8ffbbcf0ae
institution Instituto de Salud Carlos III (ISCIII)
instname_str Instituto de Salud Carlos III (ISCIII)
language eng
network_acronym_str ES
network_name_str España
oai_identifier_str oai:repisalud.isciii.es:20.500.12105/12181
publishDate 2020
publishDateSort 2020
publisher Nature Publishing Group
publisherStr Nature Publishing Group
reponame_str Repisalud
spelling A network analysis to identify mediators of germline-driven differences in breast cancer prognosis. Escala-Garcia, Maria Abraham, Jean Andrulis, Irene L Anton-Culver, Hoda Arndt, Volker Ashworth, Alan Auer, Paul L Auvinen, Päivi Beckmann, Matthias W Beesley, Jonathan Behrens, Sabine Benitez, Javier Bermisheva, Marina Blomqvist, Carl Blot, William Bogdanova, Natalia V Bojesen, Stig E Bolla, Manjeet K Børresen-Dale, Anne-Lise Brauch, Hiltrud Brenner, Hermann Brucker, Sara Y Burwinkel, Barbara Caldas, Carlos Canzian, Federico Chang-Claude, Jenny Chanock, Stephen J Chin, Suet-Feung Clarke, Christine L Couch, Fergus J Cox, Angela Cross, Simon S Czene, Kamila Daly, Mary B Dennis, Joe Devilee, Peter Dunn, Janet A Dunning, Alison M Dwek, Miriam Earl, Helena M Eccles, Diana M Eliassen, A Heather Ellberg, Carolina Evans, D Gareth Fasching, Peter A Figueroa, Jonine Flyger, Henrik Gago-Dominguez, Manuela Gapstur, Susan M García-Closas, Montserrat García-Sáenz, José A Gaudet, Mia M George, Angela Giles, Graham G Goldgar, David E González-Neira, Anna Grip, Mervi Guénel, Pascal Guo, Qi Haiman, Christopher A Håkansson, Niclas Hamann, Ute Harrington, Patricia A Hiller, Louise Hooning, Maartje J Hopper, John L Howell, Anthony Huang, Chiun-Sheng Huang, Guanmengqian Hunter, David J Jakubowska, Anna John, Esther M Kaaks, Rudolf Kapoor, Pooja Middha Keeman, Renske Kitahara, Cari M Kraft, Peter Lambrechts, Diether Le Marchand, Loic Lejbkowicz, Flavio Lindblom, Annika Lubiński, Jan Mannermaa, Arto Manoochehri, Mehdi Manoukian, Siranoush Margolin, Sara Martinez, Maria Elena Maurer, Tabea Mavroudis, Dimitrios Meindl, Alfons Milne, Roger L Mulligan, Anna Marie Neuhausen, Susan L Nevanlinna, Heli Newman, William G Olshan, Andrew F Olson, Janet E Olsson, Håkan Orr, Nick Peterlongo, Paolo Petridis, Christos Prentice, Ross L Presneau, Nadege Punie, Kevin Ramachandran, Dhanya Rennert, Gad Romero, Atocha Sachchithananthan, Mythily Saloustros, Emmanouil Sawyer, Elinor J Schmutzler, Rita K Schwentner, Lukas Scott, Christopher Simard, Jacques Sohn, Christof Southey, Melissa C Swerdlow, Anthony J Tamimi, Rulla M Tapper, William J Teixeira, Manuel R Terry, Mary Beth Thorne, Heather Tollenaar, Rob A E M Tomlinson, Ian Troester, Melissa A Truong, Thérèse Turnbull, Clare Vachon, Celine M van der Kolk, Lizet E Wang, Qin Winqvist, Robert Wolk, Alicja Yang, Xiaohong R Ziogas, Argyrios Pharoah, Paul D P Hall, Per Wessels, Lodewyk F A Chenevix-Trench, Georgia Bader, Gary D Dörk, Thilo Easton, Douglas F Canisius, Sander Schmidt, Marjanka K Gonzalez Neira, Anna Andrulis, Irene L. Auer, Paul L. Beckmann, Matthias W. Bogdanova, Natalia V. Bojesen, Stig E. Bolla, Manjeet K. Brucker, Sara Y. Chanock, Stephen J. Clarke, Christine L. Couch, Fergus J. Cross, Simon S. Daly, Mary B. Dunn, Janet A. Dunning, Alison M. Earl, Helena M. Eccles, Diana M. Eliassen, A. Heather Evans, D. Gareth Fasching, Peter A. Gapstur, Susan M. García-Sáenz, José A. Gaudet, Mia M. Giles, Graham G. Goldgar, David E. Haiman, Christopher A. Harrington, Patricia A. Hooning, Maartje J. Hopper, John L. Hunter, David J. John, Esther M. Kitahara, Cari M. Koppert, Linetta B Kristensen, Vessela N Milne, Roger L. Neuhausen, Susan L. Newman, William G. Olshan, Andrew F. Olson, Janet E. Prentice, Ross L. Sawyer, Elinor J. Schmutzler, Rita K. Southey, Melissa C. Swerdlow, Anthony J. Tamimi, Rulla M. Tapper, William J. Tollenaar, Rob A. E. M. Troester, Melissa A. Vachon, Celine M. van der Kolk, Lizet E. Yang, Xiaohong R. Pharoah, Paul D. P. Wessels, Lodewyk F. A. Bader, Gary D. Easton, Douglas F. Schmidt, Marjanka K. Genetic Variation Genome-Wide Association Study Germ Cells Apoptosis Breast Neoplasms Circadian Clocks Computational Biology Female GTP-Binding Protein alpha Subunits GTP-Binding Protein alpha Subunits, Gq-G11 Gene Regulatory Networks Genotype Humans Prognosis Receptors, Estrogen Signal Transduction Identifying the underlying genetic drivers of the heritability of breast cancer prognosis remains elusive. We adapt a network-based approach to handle underpowered complex datasets to provide new insights into the potential function of germline variants in breast cancer prognosis. This network-based analysis studies ~7.3 million variants in 84,457 breast cancer patients in relation to breast cancer survival and confirms the results on 12,381 independent patients. Aggregating the prognostic effects of genetic variants across multiple genes, we identify four gene modules associated with survival in estrogen receptor (ER)-negative and one in ER-positive disease. The modules show biological enrichment for cancer-related processes such as G-alpha signaling, circadian clock, angiogenesis, and Rho-GTPases in apoptosis. Nature Publishing Group http://hdl.handle.net/20.500.12105/12181
spellingShingle A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.
Escala-Garcia, Maria
Genetic Variation
Genome-Wide Association Study
Germ Cells
Apoptosis
Breast Neoplasms
Circadian Clocks
Computational Biology
Female
GTP-Binding Protein alpha Subunits
GTP-Binding Protein alpha Subunits, Gq-G11
Gene Regulatory Networks
Genotype
Humans
Prognosis
Receptors, Estrogen
Signal Transduction
title A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.
title_full A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.
title_fullStr A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.
title_full_unstemmed A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.
title_short A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.
title_sort A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.
topic Genetic Variation
Genome-Wide Association Study
Germ Cells
Apoptosis
Breast Neoplasms
Circadian Clocks
Computational Biology
Female
GTP-Binding Protein alpha Subunits
GTP-Binding Protein alpha Subunits, Gq-G11
Gene Regulatory Networks
Genotype
Humans
Prognosis
Receptors, Estrogen
Signal Transduction
topic_facet Genetic Variation
Genome-Wide Association Study
Germ Cells
Apoptosis
Breast Neoplasms
Circadian Clocks
Computational Biology
Female
GTP-Binding Protein alpha Subunits
GTP-Binding Protein alpha Subunits, Gq-G11
Gene Regulatory Networks
Genotype
Humans
Prognosis
Receptors, Estrogen
Signal Transduction
url http://hdl.handle.net/20.500.12105/12181