Mixed strain pathogen populations accelerate the evolution of antibiotic resistance in patients

Antibiotic resistance poses a global health threat, but the within-host drivers of resistance remain poorly understood. Pathogen populations are often assumed to be clonal within hosts, and resistance is thought to emerge due to selection for de novo variants. Here we show that mixed strain populati...

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Authors: Diaz Caballero, Julio; Wheatley, Rachel M; Kapel, Natalia; López-Causapé, Carla; Van der Schalk, Thomas; Quinn, Angus; Shaw, Liam P; Ogunlana, Lois; Recanatini, Claudia; Xavier, Basil Britto; Timbermont, Leen; Kluytmans, Jan; Ruzin, Alexey; Esser, Mark; Malhotra-Kumar, Surbhi; Oliver, Antonio; MacLean, R Craig
Format: Article
Publication date:2023
Country:España
Institution:Conselleria de Salut i Consum del Govern de les Illes Balears
Repository:Docusalut
Language:English
OAI Identifier:oai:docusalut.com:20.500.13003/19376
Online Access:https://hdl.handle.net/20.500.13003/19376
Access Level:Open access
Keyword:Humans
Patients
Drug Resistance, Microbial
Humanos
Pacientes
Farmacorresistencia Microbiana
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author Diaz Caballero, Julio
author2 Wheatley, Rachel M
Kapel, Natalia
López-Causapé, Carla
Van der Schalk, Thomas
Quinn, Angus
Shaw, Liam P
Ogunlana, Lois
Recanatini, Claudia
Xavier, Basil Britto
Timbermont, Leen
Kluytmans, Jan
Ruzin, Alexey
Esser, Mark
Malhotra-Kumar, Surbhi
Oliver, Antonio
MacLean, R Craig
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author_browse Diaz Caballero, Julio
Esser, Mark
Kapel, Natalia
Kluytmans, Jan
López-Causapé, Carla
MacLean, R Craig
Malhotra-Kumar, Surbhi
Ogunlana, Lois
Oliver, Antonio
Quinn, Angus
Recanatini, Claudia
Ruzin, Alexey
Shaw, Liam P
Timbermont, Leen
Van der Schalk, Thomas
Wheatley, Rachel M
Xavier, Basil Britto
author_facet Diaz Caballero, Julio
Wheatley, Rachel M
Kapel, Natalia
López-Causapé, Carla
Van der Schalk, Thomas
Quinn, Angus
Shaw, Liam P
Ogunlana, Lois
Recanatini, Claudia
Xavier, Basil Britto
Timbermont, Leen
Kluytmans, Jan
Ruzin, Alexey
Esser, Mark
Malhotra-Kumar, Surbhi
Oliver, Antonio
MacLean, R Craig
author_role author
collection Docusalut
description Antibiotic resistance poses a global health threat, but the within-host drivers of resistance remain poorly understood. Pathogen populations are often assumed to be clonal within hosts, and resistance is thought to emerge due to selection for de novo variants. Here we show that mixed strain populations are common in the opportunistic pathogen P. aeruginosa. Crucially, resistance evolves rapidly in patients colonized by multiple strains through selection for pre-existing resistant strains. In contrast, resistance evolves sporadically in patients colonized by single strains due to selection for novel resistance mutations. However, strong trade-offs between resistance and growth rate occur in mixed strain populations, suggesting that within-host diversity can also drive the loss of resistance in the absence of antibiotic treatment. In summary, we show that the within-host diversity of pathogen populations plays a key role in shaping the emergence of resistance in response to treatment.
eu_rights_str_mv openAccess
format article
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institution Conselleria de Salut i Consum del Govern de les Illes Balears
instname_str Conselleria de Salut i Consum del Govern de les Illes Balears
language eng
network_acronym_str ES
network_name_str España
oai_identifier_str oai:docusalut.com:20.500.13003/19376
publishDate 2023
publishDateSort 2023
publisher Nature
publisherStr Nature
reponame_str Docusalut
spelling Mixed strain pathogen populations accelerate the evolution of antibiotic resistance in patients Diaz Caballero, Julio Wheatley, Rachel M Kapel, Natalia López-Causapé, Carla Van der Schalk, Thomas Quinn, Angus Shaw, Liam P Ogunlana, Lois Recanatini, Claudia Xavier, Basil Britto Timbermont, Leen Kluytmans, Jan Ruzin, Alexey Esser, Mark Malhotra-Kumar, Surbhi Oliver, Antonio MacLean, R Craig Humans Patients Drug Resistance, Microbial Humanos Pacientes Farmacorresistencia Microbiana Antibiotic resistance poses a global health threat, but the within-host drivers of resistance remain poorly understood. Pathogen populations are often assumed to be clonal within hosts, and resistance is thought to emerge due to selection for de novo variants. Here we show that mixed strain populations are common in the opportunistic pathogen P. aeruginosa. Crucially, resistance evolves rapidly in patients colonized by multiple strains through selection for pre-existing resistant strains. In contrast, resistance evolves sporadically in patients colonized by single strains due to selection for novel resistance mutations. However, strong trade-offs between resistance and growth rate occur in mixed strain populations, suggesting that within-host diversity can also drive the loss of resistance in the absence of antibiotic treatment. In summary, we show that the within-host diversity of pathogen populations plays a key role in shaping the emergence of resistance in response to treatment. Nature https://hdl.handle.net/20.500.13003/19376
spellingShingle Mixed strain pathogen populations accelerate the evolution of antibiotic resistance in patients
Diaz Caballero, Julio
Humans
Patients
Drug Resistance, Microbial
Humanos
Pacientes
Farmacorresistencia Microbiana
title Mixed strain pathogen populations accelerate the evolution of antibiotic resistance in patients
title_full Mixed strain pathogen populations accelerate the evolution of antibiotic resistance in patients
title_fullStr Mixed strain pathogen populations accelerate the evolution of antibiotic resistance in patients
title_full_unstemmed Mixed strain pathogen populations accelerate the evolution of antibiotic resistance in patients
title_short Mixed strain pathogen populations accelerate the evolution of antibiotic resistance in patients
title_sort Mixed strain pathogen populations accelerate the evolution of antibiotic resistance in patients
topic Humans
Patients
Drug Resistance, Microbial
Humanos
Pacientes
Farmacorresistencia Microbiana
topic_facet Humans
Patients
Drug Resistance, Microbial
Humanos
Pacientes
Farmacorresistencia Microbiana
url https://hdl.handle.net/20.500.13003/19376